https://harrycaufield.net/severalog daily 0.75 2020-01-23 https://harrycaufield.net/severalog/2020/1/23/more-wearable-adversarial-examples monthly 0.5 2020-01-23 https://images.squarespace-cdn.com/content/v1/54f74341e4b0f00948dfa5af/1579803432463-XM1L318MS2K4K0XD3GZA/yolov2.png severalog - More wearable adversarial examples https://harrycaufield.net/severalog/2019/10/3/l462w69qlomo6oxyp71q0nfni6f784 monthly 0.5 2019-10-04 https://images.squarespace-cdn.com/content/v1/54f74341e4b0f00948dfa5af/1570139089636-ZEWNJ1BA3J7Z063AUQ4Y/image-asset.jpeg severalog - Who is biomedical data mining for? Mining remains a great metaphor because mines are both beautiful and horrific. https://images.squarespace-cdn.com/content/v1/54f74341e4b0f00948dfa5af/1570138900676-NQ0E27CD1SXOOHLFNYLM/bread-calories-diet-37417.jpg severalog - Who is biomedical data mining for? Let’s keep track of every measurement, not just the obvious ones. How tall was your lunch, anyway? https://harrycaufield.net/severalog/2019/8/30/draw-your-own-lines monthly 0.5 2019-08-30 https://images.squarespace-cdn.com/content/v1/54f74341e4b0f00948dfa5af/1567206790890-FZ1A9AOLPFSZD3Y32QXI/LA_map_1.png severalog - Draw your own lines https://harrycaufield.net/severalog/2019/7/16/your-health-data-rapidly-disappearing-into-the-distance-on-a-hijacked-stagecoach monthly 0.5 2019-07-16 https://images.squarespace-cdn.com/content/v1/54f74341e4b0f00948dfa5af/1563310670312-H30WKTDBPSUMS7G6MX4J/image-asset.png severalog - Your health data, rapidly disappearing into the distance on a hijacked stagecoach The map itself. https://harrycaufield.net/severalog/2019/7/12/how-to-make-straight-lines-and-arrows-in-powerpoint monthly 0.5 2019-07-12 https://images.squarespace-cdn.com/content/v1/54f74341e4b0f00948dfa5af/1562968694847-Z3T50FU9S4SQH9G73XTD/image-asset.png severalog - How to make straight lines and arrows in Powerpoint A slightly-off center arrow. Not the worst example. https://images.squarespace-cdn.com/content/v1/54f74341e4b0f00948dfa5af/1562968946179-BKX9TLALOT4SSFNTF8UA/format_shape.png severalog - How to make straight lines and arrows in Powerpoint https://harrycaufield.net/severalog/2019/7/5/annotation-and-conversion-with-brat-a-technical-note monthly 0.5 2019-07-09 https://images.squarespace-cdn.com/content/v1/54f74341e4b0f00948dfa5af/1562362851351-B8GG2YNA2W2XG370R55A/adventure-beautiful-cliff-1659434.jpg severalog - Annotation and conversion with brat: a technical note Image not explicitly related. https://harrycaufield.net/severalog/2019/6/27/me-me-me-mutual-exclusivity-in-understanding-biomedical-text monthly 0.5 2019-06-28 https://images.squarespace-cdn.com/content/v1/54f74341e4b0f00948dfa5af/1561680550557-QAX2K9Q5COBOYS2ETEV3/image-asset.jpeg severalog - ME, ME, ME: mutual exclusivity in understanding biomedical text What kind of bird is that? I’ve seen birds before, and could even tell you the species of some types of birds, but I couldn’t tell you what the species of this one is. If you told me it was a Green Violetear I would have no evidence to dispute the identification. Maybe it’s enough to just call it “bird”. Image credit: me. https://harrycaufield.net/severalog/2019/6/20/limitless-powerpoint-alternatives-to-the-usual-slide-presentations monthly 0.5 2019-06-21 https://images.squarespace-cdn.com/content/v1/54f74341e4b0f00948dfa5af/1561081040652-LEAZ32AQLJN8R13WFVHF/Ludus-example.png severalog - Limitless Powerpoint: alternatives to the usual slide presentations https://images.squarespace-cdn.com/content/v1/54f74341e4b0f00948dfa5af/1561154102774-N27MQPTAYUW0JZJUJNIB/prezi-example.png severalog - Limitless Powerpoint: alternatives to the usual slide presentations https://images.squarespace-cdn.com/content/v1/54f74341e4b0f00948dfa5af/1561156236142-O0TD71QER4TUBD9R9N9S/swipe-example.png severalog - Limitless Powerpoint: alternatives to the usual slide presentations https://harrycaufield.net/severalog/2019/6/18/more-thoughts-on-alternative-posters-and-alternatives-in-general monthly 0.5 2019-06-21 https://images.squarespace-cdn.com/content/v1/54f74341e4b0f00948dfa5af/1560882255023-7OK9KAF2NHTVYD97YQNA/action-plan-brainstorming-complex-212286.jpg severalog - More thoughts on alternative posters and alternatives in general Pictured: how I feel at most poster sessions, including the sensation of trying to look though the back of someone’s head https://harrycaufield.net/severalog/2019/3/27/more-alternative-posters-the-poster-as-billboard monthly 0.5 2019-03-27 https://images.squarespace-cdn.com/content/v1/54f74341e4b0f00948dfa5af/1553705486613-3QE3AG5IBF0OW78KST3W/billboardstyle-template-final.png severalog - More alternative posters: the poster as billboard https://harrycaufield.net/severalog/2018/11/21/alternative-posters-or-alternatives-to-posters monthly 0.5 2018-11-30 https://images.squarespace-cdn.com/content/v1/54f74341e4b0f00948dfa5af/1542849096395-K99NU0932OMV96SQ0317/demo_poster.png severalog - Alternative posters, or alternatives to posters Sometimes the wall of text is replaced by more tiny figures. https://images.squarespace-cdn.com/content/v1/54f74341e4b0f00948dfa5af/1542849817532-H3SERZIL2IVP7CC128E1/Gavin+Abercombie.jpg severalog - Alternative posters, or alternatives to posters https://images.squarespace-cdn.com/content/v1/54f74341e4b0f00948dfa5af/1542850805340-1M4LSZIUW71HLPIH03QE/Per+Damkier+et+al+-+ICPE2018.jpg severalog - Alternative posters, or alternatives to posters https://images.squarespace-cdn.com/content/v1/54f74341e4b0f00948dfa5af/1543556992852-JOSO7ZDXB3PXOATOXJN8/image-asset.jpeg severalog - Alternative posters, or alternatives to posters https://harrycaufield.net/severalog/2018/11/7/notes-on-notes-10-nowcomment-now monthly 0.5 2018-11-07 https://images.squarespace-cdn.com/content/v1/54f74341e4b0f00948dfa5af/1541628727624-FAWUPCJ1XDD78CKUTPC9/NowComment.jpg severalog - Notes on notes 10: A comment on NowComment now https://images.squarespace-cdn.com/content/v1/54f74341e4b0f00948dfa5af/1541632380099-U6CYYSWRHT73G3FKNSK9/hantavirus+comment.jpg severalog - Notes on notes 10: A comment on NowComment now https://harrycaufield.net/severalog/2018/9/11/notes-on-notes-9-hiding-in-plain-site monthly 0.5 2018-09-19 https://images.squarespace-cdn.com/content/v1/54f74341e4b0f00948dfa5af/1536697317434-DSBZN4HE01DP8BH4YMOF/note9.png severalog - Notes on notes 9: how to become invisible-ish Camouflage made out of QR codes and barcodes and faces and social networking logos. https://images.squarespace-cdn.com/content/v1/54f74341e4b0f00948dfa5af/1536944907259-OEPBTGQ0SIVYO77V98JH/avocado-1452326_960_720.jpg severalog - Notes on notes 9: how to become invisible-ish I zoomed in on the most feline-appearing part. https://images.squarespace-cdn.com/content/v1/54f74341e4b0f00948dfa5af/1536811704896-9HWVIDNRMWACQ50758E2/Nadruk_MORA_WP_WLOP.jpg severalog - Notes on notes 9: how to become invisible-ish Photo by G.Markuć, from Wikipedia. https://images.squarespace-cdn.com/content/v1/54f74341e4b0f00948dfa5af/1536812005150-0CCU5FXLWGXCEHWJJTUB/moro_cloud_test.jpg severalog - Notes on notes 9: how to become invisible-ish “Tree” is on the list. We can work with that. https://images.squarespace-cdn.com/content/v1/54f74341e4b0f00948dfa5af/1536812322635-295AFZ7BYWLPUUGQ3XE5/image-asset.jpeg severalog - Notes on notes 9: how to become invisible-ish Photo by Qirille, from Wikipedia. https://images.squarespace-cdn.com/content/v1/54f74341e4b0f00948dfa5af/1536812524130-FTUQMOQAXG1JRLWQGXJ7/digicam_cloud_test.jpg severalog - Notes on notes 9: how to become invisible-ish Perfect for hiding in a uniform factory. https://images.squarespace-cdn.com/content/v1/54f74341e4b0f00948dfa5af/1537245571797-HTGTCLHYJ3FYAYDT76OU/camOOO-test-1.jpg severalog - Notes on notes 9: how to become invisible-ish Still too dark. https://images.squarespace-cdn.com/content/v1/54f74341e4b0f00948dfa5af/1537246534214-UTP3SQZ4HUJ714NFQGT8/camOOO-test-1-dd1.jpg severalog - Notes on notes 9: how to become invisible-ish https://harrycaufield.net/severalog/2018/8/13/notes-on-notes-8 monthly 0.5 2018-09-11 https://images.squarespace-cdn.com/content/v1/54f74341e4b0f00948dfa5af/1534190325732-J6W8U6DHP4AVPHMA001G/note8.png severalog - Notes on notes 8 https://images.squarespace-cdn.com/content/v1/54f74341e4b0f00948dfa5af/1534802715344-WLD70LJKXSNBWZ320YPV/adorable-animal-cat-127028.jpg severalog - Notes on notes 8 We're gonna need a lot more of these little fuzzballs. https://harrycaufield.net/severalog/2018/8/1/notes-on-notes-7 monthly 0.5 2018-08-01 https://images.squarespace-cdn.com/content/v1/54f74341e4b0f00948dfa5af/1533153045395-01BN8URUMPE9ROV74ION/image-asset.png severalog - Notes on notes 7 https://harrycaufield.net/severalog/2018/7/26/notes-on-notes-6 monthly 0.5 2018-07-30 https://images.squarespace-cdn.com/content/v1/54f74341e4b0f00948dfa5af/1532628862789-RY059UXWTFYZ0XMPUZ6U/note6.png severalog - Notes on notes 6 https://harrycaufield.net/severalog/2018/7/23/notes-on-notes-5 monthly 0.5 2018-07-25 https://images.squarespace-cdn.com/content/v1/54f74341e4b0f00948dfa5af/1532367835068-600BBNNVLWZZSI591661/note5.png severalog - Notes on notes 5 https://harrycaufield.net/severalog/2018/7/20/notes-on-notes-4 monthly 0.5 2018-07-20 https://images.squarespace-cdn.com/content/v1/54f74341e4b0f00948dfa5af/1532108753209-GN5SYS5Q6MLI8XCLJO7P/note4.png severalog - Notes on notes 4 https://harrycaufield.net/severalog/2018/7/16/notes-on-notes-3 monthly 0.5 2018-07-17 https://images.squarespace-cdn.com/content/v1/54f74341e4b0f00948dfa5af/1531775395202-D54683O8S4GECU772GAU/note3.png severalog - Notes on notes 3: it's a process https://images.squarespace-cdn.com/content/v1/54f74341e4b0f00948dfa5af/1531778280727-DFW2TWK9FRAWD8Y7YMAI/1-s2.0-S0022283610012775-gr1_lrg.jpg severalog - Notes on notes 3: it's a process A bunch of 80alpha virions, complete with capsid (or head) structures, tails, and baseplates (those are harder to see; the arrow indicates one seen head-on). Image from Spilman et al. (2011) Journal of Molecular Biology. https://images.squarespace-cdn.com/content/v1/54f74341e4b0f00948dfa5af/1531781738408-NREMJLFN2FS49Y4NJA57/taxo_l27.png severalog - Notes on notes 3: it's a process https://images.squarespace-cdn.com/content/v1/54f74341e4b0f00948dfa5af/1531783546915-30G5V9LXP7BI04NZK7J4/L27+consensus.png severalog - Notes on notes 3: it's a process https://images.squarespace-cdn.com/content/v1/54f74341e4b0f00948dfa5af/1531850105679-0BD64TH9Y8JSNT307IXU/image-asset.png severalog - Notes on notes 3: it's a process Not terribly readable, I know, but that second green column to the right indicates species in Firmicutes. https://harrycaufield.net/severalog/2018/7/13/notes-on-notes-2 monthly 0.5 2018-07-13 https://images.squarespace-cdn.com/content/v1/54f74341e4b0f00948dfa5af/1531519870509-UKIE3ZWPP8Q5JU7CAL3D/image-asset.png severalog - Notes on notes 2 https://harrycaufield.net/severalog/2018/7/12/notes-on-notes monthly 0.5 2018-07-12 https://images.squarespace-cdn.com/content/v1/54f74341e4b0f00948dfa5af/1531427795399-R0QNE4FRF0SKN9ZFPSRP/note1.png severalog - Notes on notes https://harrycaufield.net/severalog/birchcanoe monthly 0.5 2017-12-05 https://harrycaufield.net/severalog/2017/4/26/undiscovered-ice-floes monthly 0.5 2017-04-26 https://images.squarespace-cdn.com/content/v1/54f74341e4b0f00948dfa5af/1493241674415-DNCB7WL4VYXE0ERNM4JG/image-asset.jpeg severalog - Undiscovered ice floes Not this guy. No relation. Some relation? https://harrycaufield.net/severalog/2017/1/9/new-orbits monthly 0.5 2017-01-09 https://images.squarespace-cdn.com/content/v1/54f74341e4b0f00948dfa5af/1483982860417-5NLG01NJ5RA8L3OUFUEL/wheeee.jpg severalog - New orbits https://harrycaufield.net/severalog/2016/8/19/a-refreshing-dip-in-the-data-pool monthly 0.5 2016-08-19 https://images.squarespace-cdn.com/content/v1/54f74341e4b0f00948dfa5af/1471628973219-67VWXGRWHYJF5Q5J4OP8/image-asset.jpeg severalog - A refreshing dip in the data pool A tiger, enjoying a swim. At least I'm assuming it's enjoying itself. Photo by Ber'Zophus on Wikimedia Commons. https://harrycaufield.net/severalog/2016/7/29/8jt1lrt7hd2vqh4heu7mcuqrdcg0od monthly 0.5 2016-08-18 https://images.squarespace-cdn.com/content/v1/54f74341e4b0f00948dfa5af/1470674281439-Z0QW48TQ6ES0S7P049BB/image-asset.png severalog - Waffling around: square pie charts in R https://images.squarespace-cdn.com/content/v1/54f74341e4b0f00948dfa5af/1470674612588-F2MNF4CCY7UDFK9TA90H/image-asset.png severalog - Waffling around: square pie charts in R https://images.squarespace-cdn.com/content/v1/54f74341e4b0f00948dfa5af/1470674817015-9HYJOE85NJIDTQ758KJ5/image-asset.png severalog - Waffling around: square pie charts in R https://images.squarespace-cdn.com/content/v1/54f74341e4b0f00948dfa5af/1470675243170-4N8PLRVMOGIIVPFGPQET/image-asset.png severalog - Waffling around: square pie charts in R https://images.squarespace-cdn.com/content/v1/54f74341e4b0f00948dfa5af/1470676654494-2MNB7UYYJHOF83HDD6S1/image-asset.png severalog - Waffling around: square pie charts in R https://images.squarespace-cdn.com/content/v1/54f74341e4b0f00948dfa5af/1470677864044-YQ6MLIG15T36B4Y25PJD/image-asset.png severalog - Waffling around: square pie charts in R There's an extra label on the empty square, unfortunately. This may not be a problem for you. https://images.squarespace-cdn.com/content/v1/54f74341e4b0f00948dfa5af/1470678930015-7HGW4X4NA0UDN2D3DJ4K/image-asset.png severalog - Waffling around: square pie charts in R https://images.squarespace-cdn.com/content/v1/54f74341e4b0f00948dfa5af/1470681027523-55PS963ILQO3T7CJB0Z8/image-asset.png severalog - Waffling around: square pie charts in R https://harrycaufield.net/severalog/2016/7/1/three-papers-about-sharing-even-if-its-just-sharing-data monthly 0.5 2016-07-01 https://images.squarespace-cdn.com/content/v1/54f74341e4b0f00948dfa5af/1467405197269-3WIJ9UO1B834XRV4CZOE/image-asset.jpeg severalog - Three papers about sharing, even if it's just sharing data If you search Wikimedia Commons for 'sharing' the most interesting results will involve milkshakes. This one is here. https://harrycaufield.net/severalog/2016/6/23/exs206taxivhgo9uw9zi8og8r563nx monthly 0.5 2016-06-23 https://images.squarespace-cdn.com/content/v1/54f74341e4b0f00948dfa5af/1466693249307-X6TVDHRB1V2N6B681TSJ/image-asset.png severalog - Microbiology in Boston and visualizing data everywhere else A sunny day outside the convention center. In a near-future dystopia, convention attendees could be tracked across the city by searching surveillance feeds for their distinctive swag bags. https://harrycaufield.net/severalog/2016/6/10/enikp25jyclv9gz7yg1pyfcjoydbbj monthly 0.5 2016-06-10 https://images.squarespace-cdn.com/content/v1/54f74341e4b0f00948dfa5af/1465580267957-J2AC7X61RTUP6Q8VMLMA/image-asset.png severalog - Hype in the looking glass This is a prism rather than a looking glass. Someday, a generation of children will experience prisms for the first time without hearing a single reference to Pink Floyd. From Wikimedia Commons. https://harrycaufield.net/severalog/2016/5/20/randomly-generated-science monthly 0.5 2016-05-20 https://harrycaufield.net/severalog/2016/5/11/hexagonal-statebins-or-hive-like-maps monthly 0.5 2016-05-11 https://images.squarespace-cdn.com/content/v1/54f74341e4b0f00948dfa5af/1462984425614-0SJQPFHEYPJSCITTE9IU/statebins_ex.jpeg severalog - Hexagonal statebins, or hive-like maps https://images.squarespace-cdn.com/content/v1/54f74341e4b0f00948dfa5af/1462987529406-IH5UX333NC4JQIGHDXCK/image-asset.jpeg severalog - Hexagonal statebins, or hive-like maps https://harrycaufield.net/severalog/2016/4/29/friday-items monthly 0.5 2016-04-29 https://images.squarespace-cdn.com/content/v1/54f74341e4b0f00948dfa5af/1461945248255-KOWAKTVVDU9DHBC3FI06/image-asset.jpeg severalog - Friday items: lists of mistakes, or at least distractions The aftermath of a recycle bin fire. I didn't start the fire. https://harrycaufield.net/severalog/2016/4/20/germany-in-photos monthly 0.5 2016-04-26 https://images.squarespace-cdn.com/content/v1/54f74341e4b0f00948dfa5af/1461585670013-TR5ONYV87CK26ALOSKRL/IMAG1105.jpg severalog - Germany in January in photos We started in Berlin at the Arte Luise Kunsthotel. Our room had been decorated by Wolfgang Petrick in the theme of "endtimes moraine," which I think could also be described as "debris found when dredging ancient riverbeds." https://images.squarespace-cdn.com/content/v1/54f74341e4b0f00948dfa5af/1461585669927-RISN7OWLWQ94JOXM238G/IMAG1108.jpg severalog - Germany in January in photos The view from the room. https://images.squarespace-cdn.com/content/v1/54f74341e4b0f00948dfa5af/1461585674250-55WZQYEN31OAZR733P92/IMG_1452608805742.jpg severalog - Germany in January in photos This is the Charlottenburg Palace. https://images.squarespace-cdn.com/content/v1/54f74341e4b0f00948dfa5af/1461585674588-XPPSMYCOSANG3V9BVKMN/IMG_1452679868461.jpg severalog - Germany in January in photos Just your requisite gloomy industrial warehouse in northwest Berlin. https://images.squarespace-cdn.com/content/v1/54f74341e4b0f00948dfa5af/1461585675291-D9XLYIDMK3SLCW50DFON/IMG_1452680207844.jpg severalog - Germany in January in photos This is the Borsigturm. Built in 1922, it was one of the first skycrapers in Berlin. https://images.squarespace-cdn.com/content/v1/54f74341e4b0f00948dfa5af/1461585675850-UPVCZ8BMSNIUGQOG1644/IMG_1452767755017.jpg severalog - Germany in January in photos OK, now we're on the other side of Germany, in Essen. The Museum Folkwang has a varied collection - including, at the time, an exhibition of the photography of Otto Steinert. https://images.squarespace-cdn.com/content/v1/54f74341e4b0f00948dfa5af/1461585676694-UHMKXZWRIP4P5C0606BW/IMG_1452775147714.jpg severalog - Germany in January in photos The Insel is a brunch/lunch place in Essen. It's island-themed, as their name implies, though that mostly means they offer several types of fish on their sandwiches. They do a good job. https://images.squarespace-cdn.com/content/v1/54f74341e4b0f00948dfa5af/1461585677117-LBA2CB5D6R53YXMAA16B/IMG_1452775977610.jpg severalog - Germany in January in photos Was für ein Zufall, Hörnchen, dass ich auch Harry heiße. https://images.squarespace-cdn.com/content/v1/54f74341e4b0f00948dfa5af/1461585677994-XGK9X60S07J317P6Q9X2/IMG_1452844710131.jpg severalog - Germany in January in photos Essen. Not shown: snow flurries, unless you look closely. https://images.squarespace-cdn.com/content/v1/54f74341e4b0f00948dfa5af/1461585678665-PNM9WGY3SQR2RLANKRPN/IMG_1452942160350.jpg severalog - Germany in January in photos This isn't in Essen anymore, but a bit farther north. You can tell by the statue of Udo Lindenberg that it's Gronau. Here's an Udo example. https://images.squarespace-cdn.com/content/v1/54f74341e4b0f00948dfa5af/1461585679188-SR994PSCUQNNT66FUQ63/IMG_1453016214259.jpg severalog - Germany in January in photos In the town of Ochtrup. https://images.squarespace-cdn.com/content/v1/54f74341e4b0f00948dfa5af/1461585679786-994MT9YM4OZ9WAKHHPKR/IMG_1453029537957.jpg severalog - Germany in January in photos It snowed a bit more. https://images.squarespace-cdn.com/content/v1/54f74341e4b0f00948dfa5af/1461585680048-B5Y7Q457I3TCLEUACTMN/IMG_1453056218982.jpg severalog - Germany in January in photos The Düsseldorf Rheinturm at night. https://images.squarespace-cdn.com/content/v1/54f74341e4b0f00948dfa5af/1461585672653-0DUU3AKZETSBCV7OXETO/IMG_20160123_090709.jpg severalog - Germany in January in photos Back in the US, it snowed on us again. https://images.squarespace-cdn.com/content/v1/54f74341e4b0f00948dfa5af/1461585673483-NJXSWRFNGNA58IIHDNIK/IMG_20160123_111840.jpg severalog - Germany in January in photos The haul. We had to search supermarkets across the nation to find some of these flavors (OK, maybe just the Gebrannte Mandeln one at the lower right). https://harrycaufield.net/severalog/2016/4/11/easy-trees-and-heatmaps-with-itol monthly 0.5 2018-09-18 https://images.squarespace-cdn.com/content/v1/54f74341e4b0f00948dfa5af/1460391082175-NKG74CK5NX8F3WBRUE8L/image-asset.png severalog - Easy trees and heatmaps with iTOL v3 https://images.squarespace-cdn.com/content/v1/54f74341e4b0f00948dfa5af/1460391491082-W5MCPMO4P3X4D9J5O07W/image-asset.png severalog - Easy trees and heatmaps with iTOL v3 https://harrycaufield.net/severalog/2016/3/31/9eqd7qwv2q5k4bfetdrlue3devy6jy monthly 0.5 2016-03-31 https://images.squarespace-cdn.com/content/v1/54f74341e4b0f00948dfa5af/1459434742257-6T38YOQLZ2VXAZIU7ZUM/image-asset.png severalog - 16 Personality Factors and deviant positions It's certainly a blob. https://harrycaufield.net/severalog/2016/3/15/2pejrxpa5t33pxp7pc3mezklf9v9z7 monthly 0.5 2018-07-20 https://images.squarespace-cdn.com/content/v1/54f74341e4b0f00948dfa5af/1458051148450-Q1TDEIDRTKZEVU9LX1MQ/image-asset.jpeg severalog - Bad maps and artificial boundaries We may never know what Washington, DC watches. https://images.squarespace-cdn.com/content/v1/54f74341e4b0f00948dfa5af/1458129172967-AHF2CT7B2P5JKW2MMTBR/image-asset.png severalog - Bad maps and artificial boundaries DC is here, too. No Puerto Rico, though. https://harrycaufield.net/severalog/2016/3/1/heatmaps-in-r-two-ways monthly 0.5 2016-03-05 https://images.squarespace-cdn.com/content/v1/54f74341e4b0f00948dfa5af/1456863779676-G34MGN1K5X4EBD4YQP75/image-asset.png severalog - Heatmaps in R, two ways https://images.squarespace-cdn.com/content/v1/54f74341e4b0f00948dfa5af/1456863994853-MCEW006LZYFCRMKEP938/image-asset.png severalog - Heatmaps in R, two ways https://images.squarespace-cdn.com/content/v1/54f74341e4b0f00948dfa5af/1456871575622-WO9O29W6V42ITMXG6JBT/image-asset.png severalog - Heatmaps in R, two ways https://images.squarespace-cdn.com/content/v1/54f74341e4b0f00948dfa5af/1456873497918-AI1I6C8APWXIRO0XQSOS/image-asset.png severalog - Heatmaps in R, two ways https://images.squarespace-cdn.com/content/v1/54f74341e4b0f00948dfa5af/1456950516970-IM1NBBNJXXPQ7XV38KQH/image-asset.png severalog - Heatmaps in R, two ways https://images.squarespace-cdn.com/content/v1/54f74341e4b0f00948dfa5af/1456951077006-LOUYZZP9UW4CQTQTM3RY/image-asset.png severalog - Heatmaps in R, two ways https://images.squarespace-cdn.com/content/v1/54f74341e4b0f00948dfa5af/1456957037713-ZXQKKCKE222AME2MVQAR/image-asset.png severalog - Heatmaps in R, two ways https://harrycaufield.net/severalog/2016/2/22/many-legged-codebeasts-from-the-deep monthly 0.5 2016-02-22 https://harrycaufield.net/severalog/2016/2/19/bits-and-pieces-for-friday-feb-19 monthly 0.5 2016-02-19 https://images.squarespace-cdn.com/content/v1/54f74341e4b0f00948dfa5af/1455899852935-BED8Q8EJISTEB8DMP6JR/image-asset.png severalog - Condiments and weather for Friday This is Star Wars themed mustard. I imagine one can buy a similar product in the US but this is one mustard of many in your average German supermarket. All the photos I took on this trip are monochromatic. https://images.squarespace-cdn.com/content/v1/54f74341e4b0f00948dfa5af/1455900049024-PF1MJAKB2E1FV1UDD880/image-asset.jpeg severalog - Condiments and weather for Friday This is my car. I've blurred out the license plate so you can't steal my identity. https://harrycaufield.net/severalog/2015/12/14/mining-for-text-and-minding-for-graphs monthly 0.5 2015-12-14 https://images.squarespace-cdn.com/content/v1/54f74341e4b0f00948dfa5af/1450116099756-RHZCN8B7UAUC2T79F317/untitled-creation22363.png severalog - Mining for text and minding for graphs Example output from Mind the Graph. Now I've gone anthropomorphic with a phage again. https://harrycaufield.net/severalog/2015/12/11/friday-maps monthly 0.5 2015-12-11 https://images.squarespace-cdn.com/content/v1/54f74341e4b0f00948dfa5af/1449860184759-T7ZVEDSHOWLKL7WYIRXD/US+Cities.png severalog - Friday maps It's mostly white because of minimalism and maybe a little Americentrism. https://harrycaufield.net/severalog/2015/12/7/microphones-ubuntu-and-ambiguous-solutions monthly 0.5 2015-12-07 https://images.squarespace-cdn.com/content/v1/54f74341e4b0f00948dfa5af/1449517904221-BCQTQWTNOF9IG035RPFC/image-asset.jpeg severalog - Microphones, Ubuntu, and ambiguous solutions The Yeti Pro. It's a nice mic. It lets me put my silly voices on the Internet. https://harrycaufield.net/severalog/2015/12/4/belly-full-of-virus monthly 0.5 2015-12-04 https://harrycaufield.net/severalog/2015/12/1/getting-the-picture-part-two monthly 0.5 2015-12-04 https://images.squarespace-cdn.com/content/v1/54f74341e4b0f00948dfa5af/1448991715270-O2I8NI87YM7LBVLUFRQD/image-asset.png severalog - Getting the picture - part two An example pie chart. Don't make something like this. I made it on Chartgo.com. https://images.squarespace-cdn.com/content/v1/54f74341e4b0f00948dfa5af/1449079685412-NM6XJYAAVCTW9YI8QHBV/image-asset.png severalog - Getting the picture - part two All the taxonomic groups in Mammalia, as per iTOL. Don't blame me for polytomy. https://images.squarespace-cdn.com/content/v1/54f74341e4b0f00948dfa5af/1448993677429-13WM0N530U4U15VUQZEZ/image-asset.jpeg severalog - Getting the picture - part two Sources of known genomic islands in Firmicutes - those present in the Islander database, at least. Notice how Krona summarizes some groups as "n more". That's very helpful when there are as many group names as we have here. https://images.squarespace-cdn.com/content/v1/54f74341e4b0f00948dfa5af/1448994834842-D2CGOFPLZH6K4IMYBI2F/image-asset.png severalog - Getting the picture - part two The Treevolution interface and an example tree. The interface is a bit like that in The Sims, with its curvy menus and cheery icons. https://images.squarespace-cdn.com/content/v1/54f74341e4b0f00948dfa5af/1449082541875-G2DP9PSRGGY046E9WLC1/image-asset.png severalog - Getting the picture - part two Not very exciting, but fake data seldom is. https://harrycaufield.net/severalog/2015/11/17/getting-the-picture monthly 0.5 2015-11-20 https://images.squarespace-cdn.com/content/v1/54f74341e4b0f00948dfa5af/1447778076442-IQIHKWVM7DS8PH5UIZIY/image-asset.png severalog - Getting the picture - part one One of my networks in its raw form. I could re-arrange it but it still wouldn't make any sense. It needs to be trimmed, or maybe even decimated. https://images.squarespace-cdn.com/content/v1/54f74341e4b0f00948dfa5af/1447775511734-M0TYEZ5NBDMQPVLXIG7J/image-asset.png severalog - Getting the picture - part one A recently-made slide on Slides.com. Not the best example, perhaps, but it's a start. https://images.squarespace-cdn.com/content/v1/54f74341e4b0f00948dfa5af/1447776448438-AGF38YTMJTPKGBX9YZ95/image-asset.jpeg severalog - Getting the picture - part one Fig. 2 from Eren et al. (2015). You spin me right round, baby, right round. https://harrycaufield.net/severalog/2015/11/8/just-like-stop-me monthly 0.5 2015-11-08 https://harrycaufield.net/severalog/2015/10/27/y-x- monthly 0.5 2015-10-27 https://harrycaufield.net/severalog/2015/10/24/a-few-bits-to-chew-on monthly 0.5 2015-10-24 https://images.squarespace-cdn.com/content/v1/54f74341e4b0f00948dfa5af/1445697140311-J4HXJ7O5Q96613OAGMMH/image-asset.jpeg severalog - A few bits to chew on A shipworm. It's quite simple, physiologically. From Wikimedia Commons. https://harrycaufield.net/severalog/2015/10/16/h5bumzk6hocxo12jyrnje8guamcysf monthly 0.5 2015-10-16 https://harrycaufield.net/severalog/2015/10/13/6o1xlmjanswr4n6znle0wcrkfrfagx monthly 0.5 2015-10-13 https://harrycaufield.net/severalog/2015/9/19/clockmakers-and-temptation monthly 0.5 2015-09-24 https://harrycaufield.net/severalog/2015/9/7/0doezm9bp9gn3wyqlsoll67yn6inj8 monthly 0.5 2015-09-07 https://images.squarespace-cdn.com/content/v1/54f74341e4b0f00948dfa5af/1441635711255-AMYTIQS3FCI27E7Y4PXY/image-asset.png severalog - Followers, following, and false fellows https://images.squarespace-cdn.com/content/v1/54f74341e4b0f00948dfa5af/1441636437497-GIYAGRF0GXYAWSMFKAAS/image-asset.png severalog - Followers, following, and false fellows https://images.squarespace-cdn.com/content/v1/54f74341e4b0f00948dfa5af/1441636905239-I83YZOTFDY6NO1KYUJKT/image-asset.png severalog - Followers, following, and false fellows https://images.squarespace-cdn.com/content/v1/54f74341e4b0f00948dfa5af/1441655068653-VIAPZOECZQW81H8VYZD2/image-asset.png severalog - Followers, following, and false fellows https://harrycaufield.net/severalog/2015/9/2/a-debugging-note-about-mendeley monthly 0.5 2019-06-20 https://harrycaufield.net/severalog/2015/9/1/three-strange-but-colorful-things-to-see monthly 0.5 2015-09-02 https://images.squarespace-cdn.com/content/v1/54f74341e4b0f00948dfa5af/1441200219127-Z8L70MEGA8HFSNVWJKUA/image-asset.png severalog - Three strange but colorful things to see Yes, that's a crab. It's a fellow passenger. https://images.squarespace-cdn.com/content/v1/54f74341e4b0f00948dfa5af/1441200485083-9XV1D41KON9QH7D3KEQD/image-asset.png severalog - Three strange but colorful things to see https://harrycaufield.net/severalog/2015/8/11/bacteria-with-missing-pieces-three-papers monthly 0.5 2015-08-11 https://images.squarespace-cdn.com/content/v1/54f74341e4b0f00948dfa5af/1439311605219-RWQCPNE6F4F7EA2R478U/image-asset.jpeg severalog - Bacteria with missing pieces: three papers It's Caulobacter crescentus, named for everyone's favorite shape of roll. https://harrycaufield.net/severalog/2015/8/5/the-future-was-never-now monthly 0.5 2015-08-05 https://images.squarespace-cdn.com/content/v1/54f74341e4b0f00948dfa5af/1438787363394-91P6HZCJ8JAGFZYJBZL6/image-asset.jpeg severalog - The future was never now In the Future, war is waged with levers. Also bombs, but that's nothing new. https://harrycaufield.net/severalog/2015/8/3/a-few-quick-tips-for-better-presentations-andor-cutlery-usage monthly 0.5 2015-08-03 https://images.squarespace-cdn.com/content/v1/54f74341e4b0f00948dfa5af/1438622494047-3HNXJPOX5Z3664TM94VO/image-asset.jpeg severalog - A few quick tips for better presentations and/or cutlery usage Tip zero: Ensure lighting provides maximum silhouette effect. https://harrycaufield.net/severalog/2015/7/28/xiee6xn9jktrwftxemuo7i2c767jx7 monthly 0.5 2015-07-28 https://harrycaufield.net/severalog/2015/7/28/sites-you-may-be-surprised-to-find-still-exist monthly 0.5 2015-07-28 https://harrycaufield.net/severalog/2015/7/27/man-its-so-loud-in-here monthly 0.5 2015-07-27 https://images.squarespace-cdn.com/content/v1/54f74341e4b0f00948dfa5af/1438007990936-9JM8KE0EE96GFO77M139/upload.jpeg severalog - Man, it's so loud in here So clean. https://harrycaufield.net/severalog/2015/7/25/phage-procapsids-how-do-they-work monthly 0.5 2015-07-27 https://images.squarespace-cdn.com/content/v1/54f74341e4b0f00948dfa5af/1437849503352-AQXVIM95RFES30DR3JQ8/image-asset.jpeg severalog - Phage procapsids - how do they work? Some of my notes on a lecture from 2011. "Escape" probably isn't the right word, and that last word should be "scaffold", but you get the idea. https://harrycaufield.net/severalog/2015/7/24/automating-your-listening-experience monthly 0.5 2015-07-24 https://harrycaufield.net/severalog/2015/7/20/the-power-of-two-or-many-more monthly 0.5 2015-12-01 https://images.squarespace-cdn.com/content/v1/54f74341e4b0f00948dfa5af/1437421087023-JN2I1C1MZ3B2ZN1ZVV4T/image-asset.png severalog - The power of two or many more Copies of copies. Image from Imartin6 on Wikimedia Commons, along with more of an explanation than I'm likely to provide here. Suffice to say that each square is a gene and that duplication is a source of change among gene sequences. https://harrycaufield.net/severalog/2015/6/25/data-in-plates-and-innovations-in-breakfast monthly 0.5 2015-06-25 https://harrycaufield.net/severalog/2015/6/17/a-very-brief-guide-to-converting-e-coli-gene-ids monthly 0.5 2015-06-17 https://images.squarespace-cdn.com/content/v1/54f74341e4b0f00948dfa5af/1434567715770-U4NVR34PD0MMO9V8CK2M/image-asset.png severalog - A very brief guide to converting E. coli gene IDs Many names for the same thing. https://harrycaufield.net/severalog/2015/6/16/the-value-of-piles-of-scribbles monthly 0.5 2015-07-13 https://images.squarespace-cdn.com/content/v1/54f74341e4b0f00948dfa5af/1434487704778-QONFBLDCNL9RJXDT6EWD/image-asset.jpeg severalog - The value of piles of scribbles https://harrycaufield.net/severalog/2015/6/12/wikipedia-based-poetry-for-june-12-2015-plus-neural-networks monthly 0.5 2015-06-12 https://harrycaufield.net/severalog/2015/5/27/overthinking-and-underscanning monthly 0.5 2015-05-27 https://harrycaufield.net/severalog/2015/5/21/spoiled-for-choice monthly 0.5 2015-05-21 https://images.squarespace-cdn.com/content/v1/54f74341e4b0f00948dfa5af/1432231463380-5X3FMAW0C5MJLYZ7OF93/image-asset.png severalog - Spoiled for choice Is there any other kind of post-rock? https://harrycaufield.net/severalog/2015/5/18/yeast-drugs-and-copies-of-copies monthly 0.5 2015-05-20 https://harrycaufield.net/severalog/2015/5/15/the-tiniest-eye monthly 0.5 2015-05-15 https://images.squarespace-cdn.com/content/v1/54f74341e4b0f00948dfa5af/1431701231099-GXRQFYHSAROGT0YD4B3N/image-asset.jpeg severalog - The tiniest eye Here's looking at you. Figure is from Hayakawa et al. (2015) PLoS ONE. The ocelloid parts are marked by H and R. See the paper for more details. https://harrycaufield.net/severalog/2015/5/7/venn-diagrams-in-r-or-how-to-go-around-in-circles monthly 0.5 2016-02-23 https://images.squarespace-cdn.com/content/v1/54f74341e4b0f00948dfa5af/1431026396809-I424JANP5JEI5REVK0T6/image-asset.png severalog - Venn diagrams in R, or how to go around in circles https://images.squarespace-cdn.com/content/v1/54f74341e4b0f00948dfa5af/1431026730304-MVH6MIDX0MR9IQ9BBKRK/image-asset.png severalog - Venn diagrams in R, or how to go around in circles https://images.squarespace-cdn.com/content/v1/54f74341e4b0f00948dfa5af/1431028328047-M1EYOCUSWIJJ5BQ6I8Z7/image-asset.png severalog - Venn diagrams in R, or how to go around in circles https://images.squarespace-cdn.com/content/v1/54f74341e4b0f00948dfa5af/1431030515507-QKAFZHSISQP4WFD76MC8/image-asset.png severalog - Venn diagrams in R, or how to go around in circles https://images.squarespace-cdn.com/content/v1/54f74341e4b0f00948dfa5af/1456248844723-DSGSVRL56A39MRFC4PH5/image-asset.png severalog - Venn diagrams in R, or how to go around in circles https://images.squarespace-cdn.com/content/v1/54f74341e4b0f00948dfa5af/1456248967428-G5U14I2SNJWYUYHDZQU4/image-asset.png severalog - Venn diagrams in R, or how to go around in circles https://images.squarespace-cdn.com/content/v1/54f74341e4b0f00948dfa5af/1456249588729-OSX77OCYLF9OAC5Q7OYH/image-asset.png severalog - Venn diagrams in R, or how to go around in circles https://harrycaufield.net/severalog/2015/5/6/two-updates monthly 0.5 2015-05-06 https://harrycaufield.net/severalog/2015/5/5/wg0az3cbaallli8mgal822zqexja14 monthly 0.5 2015-05-05 https://images.squarespace-cdn.com/content/v1/54f74341e4b0f00948dfa5af/1430844022428-K0DFKMXYCUUDRPHDNVHG/image-asset.jpeg severalog - Investments, email, and monkey tails Karlsruhe, Germany was apparently the site of the first email from Germany to the US. The @ symbol may be called an Affenschwanz, or monkey's tail, in German. One day, maps will refer to this place as Kaffenschwanzruhe. This image is from StromBer on Wikimedia Commons. https://harrycaufield.net/severalog/2015/4/23/t4wem2lmn4hc42fdlsejqc5dmi6bsj monthly 0.5 2015-04-24 https://images.squarespace-cdn.com/content/v1/54f74341e4b0f00948dfa5af/1429818668697-QP5VPTKX2QHF5G42YUKC/image-asset.jpeg severalog - Placebo research and alternative reviews A selection of 19th century homeopathic remedies. 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